AI agent · Bioinformatics
Gut Pilot: an AI reviewer for microbiome analysis
An AI agent proposes every methodological call in a microbiome analysis: normalization, distance metric, significance level. Each one comes with a citation. I review it, confirm or override, and it lands in an audit trail.
View source on GitHub- Reviewer gates
- 10Reviewer gatesPoints where the pipeline can't proceed on the model's judgement alone
- Layers
- 3LayersCompute, Reasoning, and Evidence, kept strictly separate
- Real datasets
- 2Real datasetsColorectal cancer and Parkinson's disease, run through the real backend
- Samples analyzed
- 638Samples analyzed490 + 148 samples across both captured runs
For this portfolio, I ran both datasets through the real pipeline and built this demo from the actual output.
This interactive demo is built for a larger screen.
Open this page on a laptop or desktop to explore all 8 pipeline steps.